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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ambra1, autophagy/beclin 1 regulator 1
Sequence ID:NM_001080754
NM_172669
Entrez Gene ID:228361
Ensembl ID:ENSMUSG00000040506

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 91918138 - 91918843

 Exon Info From UCSC:
NM_001080754
NM_172669

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766257  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080754 NP_001074223    
NM_172669 NP_766257 A2AH22 WD40

Related Sequences

 
mRNAGenPeptSwissProt
AK037516 BAC29823 A2AH22
AK083596 BAC38965 A2AH22
AK129433 BAC98243 A2AH22
AK148887 BAE28691 A2AH22
AK155513 BAE33303 A2AH22
AK169280 BAE41038 A2AH22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ambra1 NP_766257 R.norvegicus Ambra1 59319   NP_001127813 99
H.sapiens AMBRA1 55626 Gene Info NP_060219 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)