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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit
Sequence ID:NM_001159533
NM_001159534
NM_001159535
NM_001255997
NM_001255998
NM_001255999
NM_001256000
NM_001256001
NM_001256002
NM_009781
Entrez Gene ID:12288
Ensembl ID:ENSMUSG00000051331

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F1|6 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 118593891 - 119196231

 Exon Info From UCSC:
NM_001159533
NM_001159534
NM_001159535
NM_009781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861050Full LengthBC138031calcium channel, voltage-dependent, L type, alpha 1C subunit
9053652Full LengthBC145104calcium channel, voltage-dependent, L type, alpha 1C subunit
9053653Full LengthBC145105calcium channel, voltage-dependent, L type, alpha 1C subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033911  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159533 NP_001153005 Q01815  
NM_001159534 NP_001153006    
NM_001159535 NP_001153007    
NM_001255997 NP_001242926    
NM_001255998 NP_001242927    
NM_001255999 NP_001242928    
NM_001256000 NP_001242929    
NM_001256001 NP_001242930    
NM_001256002 NP_001242931    
NM_009781 NP_033911 Q01815 Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
L06233 AAA37351 Q01815
U17869 AAA62612 Q01815
M57973 AAA63291 Q01815
BC138031 AAI38032 Q5S8D1
BC145104 AAI45105 B7ZN95
BC145105 AAI45106 Q5S8D1
AY728090 AAV59464 Q5S8D1
AK135061 BAE22405 Q3UY08
AB259049 BAF03165 Q0PCR6
AB259050 BAF03166 Q0PCR5
AB259051 BAF03167 Q0PCR4
FM872409 CAS06712 C7TQ57
FM872410 CAS06713 C7TQ58
FM872411 CAS06714 C7TQ59
FM872412 CAS06715 C7TQ60
FM872413 CAS06716 C7TQ61
FM872414 CAS06717 C7TQ62

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna1c NP_033911 R.norvegicus Cacna1c 24239   NP_036649 98
H.sapiens CACNA1C 775 Gene Info NP_955630 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)