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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smarcd3, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
Sequence ID:NM_025891
Entrez Gene ID:66993
Ensembl ID:ENSMUSG00000028949

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 24592624 - 24601948

 Exon Info From UCSC:
NM_025891

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3586276Full LengthBC013122SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
6817219Full LengthBC060525SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080167  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025891 NP_080167 Q6P9Z1 SWIB

Related Sequences

 
mRNAGenPeptSwissProt
BC013122 AAH13122 Q6P9Z1
BC060525 AAH60525 Q6P9Z1
AK005094 BAB23813 Q6P9Z1
AK019374 BAB31685 Q6P9Z1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcd3 NP_080167 R.norvegicus Smarcd3 296732   NP_001011966 100
H.sapiens SMARCD3 6604 Gene Info NP_001003801 100
A.gambiae AgaP_AGAP005336 1276044   XP_315349 67
D.melanogaster Bap60 32268   NP_511143 66
C.elegans tag-246 176426   NP_499250 56
C.elegans C18E3.2 172018   NP_491329 51
S.pombe ssr3 2541438   NP_593110 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)