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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Il6st, interleukin 6 signal transducer
Sequence ID:NM_010560
Entrez Gene ID:16195
Ensembl ID:ENSMUSG00000021756

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D2.2|13 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 112505439 - 112506837

 Exon Info From UCSC:
NM_010560

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6834623Full LengthBC058679interleukin 6 signal transducer
5372217IncompleteBC058551interleukin 6 signal transducer
5374535IncompleteBC049887interleukin 6 signal transducer

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034690  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010560 NP_034690 Q00560
Q6PDI9
fn3
Lep_receptor_Ig

Related Sequences

 
mRNAGenPeptSwissProt
M83336 AAA37723 Q00560
BC058679 AAH58679 Q6PDI9
AK142637 BAE25142 Q3UQA0
AK170020 BAE41514 Q3TDT5
X62646 CAA44515 Q00560

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Il6st NP_034690 R.norvegicus Il6st 25205   NP_001008725 86
H.sapiens IL6ST 3572 Gene Info NP_002175 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta