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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ngef, neuronal guanine nucleotide exchange factor
Sequence ID:NM_001111314
NM_019867
Entrez Gene ID:53972
Ensembl ID:ENSMUSG00000026259

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 D|1 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 87476833 - 87510346

 Exon Info From UCSC:
NM_001111314
NM_019867

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4973826Full LengthBC039279neuronal guanine nucleotide exchange factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_063920  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111314 NP_001104784    
NM_019867 NP_063920   SH3_1
PH
RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
BC022680 AAH22680 Q8CHT1
BC039279 AAH39279 Q8CHT1
AY038025 AAK71494 Q8CHT1
AJ238898 CAC00698 Q8CHT1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ngef NP_001104784 R.norvegicus Ngef 246217   NP_001129713 98
H.sapiens NGEF 25791 Gene Info NP_062824 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)