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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdx4, caudal type homeobox 4
Sequence ID:NM_007674
Entrez Gene ID:12592
Ensembl ID:ENSMUSG00000031326

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D|X 42.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 103321984 - 103330592

NM_007674 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1658100516736100517393
659804100523347100523492
8051595100524772100525562

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733907Full LengthBC119158caudal type homeo box 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031700  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007674 NP_031700 Q78Z64
Q07424
Homeobox
Caudal_act

Related Sequences

 
mRNAGenPeptSwissProt
L08061 AAA16901 Q78Z64
Q07424
BC119158 AAI19159 Q78Z64
AK141681 BAE24796 Q3UR92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdx4 NP_031700 R.norvegicus Cdx4 302400   NP_001100412 97
H.sapiens CDX4 1046 Gene Info NP_005184 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)