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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tjp1, tight junction protein 1
Sequence ID:NM_001163574
NM_009386
Entrez Gene ID:21872
Ensembl ID:ENSMUSG00000030516

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 28.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 65296167 - 65297368

 Exon Info From UCSC:
NM_001163574
NM_009386

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861047Full LengthBC138028tight junction protein 1
2650771IncompleteBC013769tight junction protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033412  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163574 NP_001157046    
NM_009386 NP_033412 P39447 PDZ
Guanylate_kin
ZU5
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
BC013769 AAH13769 Q91YW2
BC138028 AAI38029 B9EHJ3
D14340 BAA03274 P39447

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tjp1 NP_033412 R.norvegicus Tjp1 292994   NP_001099736 96
H.sapiens TJP1 7082 Gene Info NP_003248 91
C.elegans zoo-1 173316   NP_001021685 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)