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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ldhal6b, Lactate dehydrogenase A-like 6B
Sequence ID:NM_175349
Entrez Gene ID:106557

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A1|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 5417326 - 5418712

NM_175349 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19146354173225418766

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6704800Full LengthBC061193lactate dehydrogenase A-like 6B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780558  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175349 NP_780558 Q8BVP2 Ldh_1_N
Ldh_1_C

Related Sequences

 
mRNAGenPeptSwissProt
BC061193 AAH61193 Q8BVP2
AY280363 AAP35085 Q8BVP2
AK077089 BAC36605 Q8BVP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ldhal6b NP_780558 R.norvegicus Ldhal6b 369018   NP_899163 89
H.sapiens LDHAL6B 92483 Gene Info NP_149972 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)