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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chst5, carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
Sequence ID:NM_019950
Entrez Gene ID:56773
Ensembl ID:ENSMUSG00000031952

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_019950 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11867114413034114414900
18681935114434031114434098

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014872Full LengthBC146577carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
100014749BC141429carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064334  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019950 NP_064334 Q9QUP4 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProt
AF176840 AAD56002 Q9QUP4
BC141429 AAI41430  
BC146577 AAI46578  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chst5 NP_064334 R.norvegicus Chst5 307859   NP_001100901 96
H.sapiens CHST6 4166 Gene Info NP_067628 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)