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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r43, vomeronasal 1 receptor 43
Sequence ID:NM_053220
Entrez Gene ID:113847
Ensembl ID:ENSMUSG00000068231

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 89869460 - 89870529

NM_053220 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19428981950689820447

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129879Full LengthBC125364vomeronasal 1 receptor, A5
40130561Full LengthBC132284vomeronasal 1 receptor, A5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444450  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053220 NP_444450 Q8VIC9 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC125364 AAI25365 Q8VIC9
BC132284 AAI32285 A2RSX3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r43 NP_444450 M.musculus Vmn1r42 113848 Gene Info NP_444451 87
M.musculus Vmn1r45 22297 Gene Info NP_035814 83
M.musculus Vmn1r51 22296 Gene Info NP_035813 82
M.musculus Vmn1r48 113845 Gene Info NP_444448 80
M.musculus Vmn1r47 113846 Gene Info NP_444449 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)