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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aacs, acetoacetyl-CoA synthetase
Sequence ID:NM_030210
Entrez Gene ID:78894
Ensembl ID:ENSMUSG00000029482

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 F

Chromosomal Position (from UCSC)

Chromosomal Position:5: 125475913 - 125516589

 Exon Info From UCSC:
NM_030210

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4235112Full LengthBC026817acetoacetyl-CoA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084486  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_030210 NP_084486 Q9D2R0 EC 6.2.1.16 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC026817 AAH26817 Q9D2R0 EC 6.2.1.16
AY091469 AAM44125 Q8K3J7  
AK019063 BAB31530 Q9D2R0 EC 6.2.1.16
AB056114 BAB63403 Q9D2R0 EC 6.2.1.16
AK034184 BAC28621 Q9D2R0 EC 6.2.1.16
AK043848 BAC31680 Q9D2R0 EC 6.2.1.16
AK044017 BAC31740 Q9D2R0 EC 6.2.1.16
AK147189 BAE27749 Q9D2R0 EC 6.2.1.16
AK150266 BAE29423 Q9D2R0 EC 6.2.1.16
AK165418 BAE38173 Q9D2R0 EC 6.2.1.16
AK165457 BAE38197 Q9D2R0 EC 6.2.1.16
AK170120 BAE41577 Q9D2R0 EC 6.2.1.16
AK170653 BAE41938 Q9D2R0 EC 6.2.1.16
AK170856 BAE42076 Q9D2R0 EC 6.2.1.16
AB054122 BAF44057 Q9D2R0 EC 6.2.1.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aacs NP_084486 R.norvegicus Aacs 65984   NP_075592 97
H.sapiens AACS 65985 Gene Info NP_076417 90
N.crassa NCU00446 3872912   XP_956765 44
C.elegans sur-5 180992   NP_509229 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)