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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lrrtm3, leucine rich repeat transmembrane neuronal 3
Sequence ID:NM_178678
Entrez Gene ID:216028
Ensembl ID:ENSMUSG00000042846

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 63929886 - 64090271

NM_178678 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117716339124463393014
177233066355059563552129
330738526355245763553002

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30044805Full LengthBC094910leucine rich repeat transmembrane neuronal 3
40060681Full LengthBC113178leucine rich repeat transmembrane neuronal 3
40060682Full LengthBC113784leucine rich repeat transmembrane neuronal 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848793  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178678 NP_848793 Q8BZ81 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC094910 AAH94910 Q4VBX1
BC113178 AAI13179 Q8BZ81
BC113784 AAI13785 Q8BZ81
AY182029 AAO67550 Q8BZ81
AK035773 BAC29181 Q8BZ81
AK035858 BAC29214 Q8BZ81
AK035882 BAC29226 Q8BZ81
AK036180 BAC29335 Q8BZA0
AK036366 BAC29398 Q8BZ81
AK163753 BAE37481 Q8BZ81
AK032485 BAE43281 Q8BZ81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrtm3 NP_848793 R.norvegicus Lrrtm3 294380   NP_001099857 99
H.sapiens LRRTM3 347731 Gene Info NP_821079 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)