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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Defb1, defensin beta 1
Sequence ID:NM_007843
Entrez Gene ID:13214
Ensembl ID:ENSMUSG00000044748

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A4|8 9.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 21776573 - 21795184

NM_007843 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11582288702622887183
1599162290489922905656

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4975536Full LengthBC024380defensin beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031869  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007843 NP_031869 Q3UQE2
P56386
Defensin_beta

Related Sequences

 
mRNAGenPeptSwissProt
BC024380 AAH24380 Q3UQE2
P56386
AK142544 BAE25100 Q3UQE2
P56386

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Defb1 NP_031869 R.norvegicus Defb1 83687   NP_113998 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)