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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Slc9a1, solute carrier family 9 (sodium/hydrogen exchanger), member 1
Sequence ID:NM_016981
Entrez Gene ID:20544
Ensembl ID:ENSMUSG00000028854

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3-E|4 64.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 133369771 - 133423698

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5702902Full LengthBC052708solute carrier family 9 (sodium/hydrogen exchanger), member 1
6529306Full LengthBC051431solute carrier family 9 (sodium/hydrogen exchanger), member 1
3500839IncompleteBC004687solute carrier family 9 (sodium/hydrogen exchanger), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058677  

Protein Infomation

NM_016981 NP_058677 Q3UDC9

Related Sequences

U51112 AAA92976 Q3UDC9
BC004687 AAH04687 Q99KF4
BC051431 AAH51431 Q80X31
BC052708 AAH52708 Q7TSV2
AK150135 BAE29332 Q3UDC9
AK154857 BAE32882 Q3U3A6
AK165501 BAE38221 Q3TN68

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Slc9a1 NP_058677 R.norvegicus Slc9a1 24782   NP_036784 97
H.sapiens SLC9A1 6548 Gene Info NP_003038 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)