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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Terf1, telomeric repeat binding factor 1
Sequence ID:NM_009352
Entrez Gene ID:21749
Ensembl ID:ENSMUSG00000025925

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E3|1 11.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 15805665 - 15843431

NM_009352 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13001579573815796037
3013961579772115797816
3975181580312115803242
5196051580596615806052
6067551580901415809163
7568681580973115809843
8699281582158715821646
92910171582348115823569
101811241582826215828368
112516331583300115833509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3470277Full LengthBC034866telomeric repeat binding factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033378  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009352 NP_033378 P70371 Myb_DNA-binding
TRF

Related Sequences

 
mRNAGenPeptSwissProt
U65586 AAB53970 P70371
BC034866 AAH34866 P70371
AK021235 BAB32340 P70371
AB109563 BAC76782 Q7TSK8
AK132022 BAE20947 Q3V252

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Terf1 NP_033378 R.norvegicus Terf1 297758   NP_001012482 82
H.sapiens TERF1 7013 Gene Info NP_059523 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta