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Gene Info

Gene Information For:Mm. Skp1a, S-phase kinase-associated protein 1A
Sequence ID:NM_011543
Entrez Gene ID:21402
Ensembl ID:ENSMUSG00000036309

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 31.0

Chromosomal Position (from UCSC)

Chromosomal Position:11: 52232070 - 52246373

NM_011543 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11245204549652045619
1252215205033852050434
2222955205608852056161
2964395205711652057259
4405805205848252058622
58114545205948652060359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3490159Full LengthBC002115S-phase kinase-associated protein 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035673  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011543 NP_035673   Skp1
Skp1_POZ

Related Sequences

 
mRNAGenPeptSwissProt
AF083214 AAD16036 Q9WTX5
Q5SUR3
BC002115 AAH02115 Q9WTX5
Q5SUR3
AK002983 BAB22496 Q9WTX5
Q5SUR3
AK010628 BAB27074 Q9WTX5
Q5SUR3
AK012498 BAB28281 Q9WTX5
Q5SUR3
AK014245 BAB29222 Q9WTX5
Q5SUR3
AK027909 BAC25660 Q9WTX5
Q5SUR3
AK078330 BAC37220 Q9WTX5
AK088339 BAC40292 Q9WTX5
Q5SUR3
AK152609 BAE31355 Q9WTX5
Q5SUR3
AK160198 BAE35688 Q9WTX5
Q5SUR3
AK166673 BAE38934 Q3TL58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Skp1a NP_035673 R.norvegicus Skp1 287280   NP_001007609 100
H.sapiens SKP1 6500 Gene Info NP_733779 99
A.gambiae AgaP_AGAP008719 1275570   XP_314827 85
D.melanogaster skpA 31016   NP_726695 77
C.elegans skr-1 172775   NP_492513 72
C.elegans skr-2 172773   NP_492512 65
A.thaliana ASK2 834224   NP_568603 62
N.crassa NCU08991 3875176   XP_959019 60
S.pombe skp1 2540917   NP_595455 58
S.cerevisiae SKP1 851928   NP_010615 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta