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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sept2, Septin 2
Sequence ID:NM_001159719
NM_010891
NM_001159717
NM_001159718
Entrez Gene ID:18000
Ensembl ID:ENSMUSG00000026276

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 D|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 93479011 - 93508111

 Exon Info From UCSC:
NM_001159719
NM_010891
NM_001159717
NM_001159718

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861656Full LengthBC138636septin 2
8861657Full LengthBC138637septin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035021  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159717 NP_001153189    
NM_001159718 NP_001153190    
NM_001159719 NP_001153191    
NM_010891 NP_035021 P42208 Septin

Related Sequences

 
mRNAGenPeptSwissProt
BC138636 AAI38637 P42208
BC138637 AAI38638 P42208
D49382 BAA08380 P42208
AK028072 BAC25737 P42208
AK146616 BAE27305 P42208
AK151591 BAE30531 P42208
AK171331 BAE42396 P42208

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sept2 NP_001153189 H.sapiens SEPT2 4735 Gene Info NP_001008491 99
R.norvegicus Sept2 117515   NP_476489 99
D.melanogaster Sep1 33114   NP_523430 77
A.gambiae AgaP_AGAP002645 1273316   XP_312282 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)