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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bop1, block of proliferation 1
Sequence ID:NM_013481
Entrez Gene ID:12181
Ensembl ID:ENSMUSG00000022557

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 D3|15 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 76455915 - 76474831

 Exon Info From UCSC:
NM_013481

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4193123Full LengthBC012693block of proliferation 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038509  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013481 NP_038509 P97452 WD40
BOP1NT

Related Sequences

 
mRNAGenPeptSwissProt
U77415 AAB19223 P97452
BC012693 AAH12693 P97452
AK079627 BAC37708 P97452
AK129058 BAC97868 P97452
AK167110 BAE39258 P97452
AK167225 BAE39350 Q3TJZ5
AK167829 BAE39851 Q3TIJ5
AK168127 BAE40096 Q3THV0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bop1 NP_038509 R.norvegicus Bop1 300050   NP_001019421 94
H.sapiens BOP1 23246 Gene Info NP_056016 85
A.gambiae BOP1_ANOGA 1269978   XP_308633 53
D.melanogaster CG5033 37036   NP_611270 52
C.elegans Y48B6A.1 175069   NP_496956 48
A.thaliana AT2G40360 818629   NP_181567 44
N.crassa NCU03321 3880647   XP_964498 44
S.pombe SPBC4F6.13c 2540888   NP_596113 43
S.cerevisiae ERB1 855068   NP_013764 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)