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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sepw1, selenoprotein W, muscle 1
Sequence ID:NM_009156
Entrez Gene ID:20364
Ensembl ID:ENSMUSG00000041571

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 A2

Chromosomal Position (from UCSC)

Chromosomal Position:7: 15917207 - 15922326

NM_009156 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
183491650255616502887
3504481650519616505294
4495231650539116505465
5245771650565316505706
5786021650579716505821
6037221650760016507719

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6814242Full LengthBC052719selenoprotein W, muscle 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009156 NP_033182 P63300  

Related Sequences

 
mRNAGenPeptSwissProt
AF015284 AAB69860 P63300
U67890 AAC53317 P63300
AF241527 AAF64481 P63300
BC052719 AAH52719 P63300
AK002870 BAC55247 P63300
AK028124 BAC55256 P63300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sepw1 NP_033182 R.norvegicus Sepw1 25545   NP_037159 100
H.sapiens SEPW1 6415 Gene Info NP_003000 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)