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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2-Q2, Histocompatibility 2, Q region locus 2
Sequence ID:NM_010392
Entrez Gene ID:15013
Ensembl ID:ENSMUSG00000091705

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 19.15

Chromosomal Position (from UCSC)

Chromosomal Position:17: 35342623 - 35343383

NM_010392 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1643547927735479340
653343547954435479813
3356103548005735480332
6118863548169935481974
88710033548210235482218
100410363548239835482430
103710993548260435482666

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861709Full LengthBC138688histocompatibility 2, Q region locus 2
8861711Full LengthBC138689histocompatibility 2, Q region locus 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034522  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010392 NP_034522 Q4KN81 MHC_I
MHC_I_C
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
M28684 AAA39675 Q31198
BC138688 AAI38689 Q4KN81
BC138689 AAI38690 Q4KN81
AY989880 AAY85367 Q4KN81
AB266872 BAF02264 Q0WXI7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2-Q2 NP_034522 M.musculus H2-Q9 110558   XP_003085174 80
M.musculus H2-Gs10 436493   NP_001137161 79
M.musculus H2-Q1 15006 Gene Info NP_034520 79
M.musculus H2-Q6 110557 Gene Info NP_997531 78
M.musculus H2-Bl 14963 Gene Info NP_032225 78
M.musculus Gm8909 667977   NP_001074501 77
M.musculus Gm10499 69717 Gene Info XP_003085179 77
H.sapiens HLA-B 3106 Gene Info NP_005505 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)