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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Caprin1, cell cycle associated protein 1
Sequence ID:NM_001111289
Entrez Gene ID:53872
Ensembl ID:ENSMUSG00000027184

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E2|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 103766798 - 103796940

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6836041Full LengthBC052427cell cycle associated protein 1
40045917IncompleteBC127030cell cycle associated protein 1

Protein Infomation

NM_001111289 NP_001104759    
NM_001111290 NP_001104760    
NM_001111291 NP_001104761    
NM_001111292 NP_001104762    
NM_016739 NP_058019 Q60865  

Related Sequences

U18773 AAA68561 Q60865
U27838 AAA82599 Q60865
BC052427 AAH52427 Q60865
BC127030 AAI27031 A1L0T9
AK031050 BAC27230 Q8CD82
AK148203 BAE28413 Q3UFZ6
AK161131 BAE36206 Q3TTW8
AK169366 BAE41114 Q3TEY4
AB373955 BAF96513 Q60865
BK001105 DAA01122 Q60865

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Caprin1 NP_001104759 R.norvegicus Caprin1 362173   NP_001012185 98
H.sapiens CAPRIN1 4076 Gene Info NP_005889 97
D.melanogaster CG18811 59172   NP_652671 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)