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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csn1s1, casein alpha s1
Sequence ID:NM_007784
Entrez Gene ID:12990
Ensembl ID:ENSMUSG00000070702

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 44.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 87680528 - 87682058

 Exon Info From UCSC:
NM_007784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2647887Full LengthBC040246casein alpha s1
2812523Full LengthBC008278casein alpha s1
3484624Full LengthBC002101casein alpha s1
3486384Full LengthBC003859casein alpha s1
3592625Full LengthBC006024casein alpha s1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007784 NP_031810 P19228 Casein

Related Sequences

 
mRNAGenPeptSwissProt
M36780 AAA37142 P19228
BC002101 AAH02101 Q99M19
BC003859 AAH03859 P19228
BC006024 AAH06024 Q99JM6
BC008278 AAH08278 Q91VV1
BC040246 AAH40246 Q91VV1
AK164762 BAE37905 Q3TP32

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csn1s1 NP_031810 R.norvegicus Csn1s1 24284   NP_620229 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)