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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prm1, protamine 1
Sequence ID:NM_013637
Entrez Gene ID:19118
Ensembl ID:ENSMUSG00000022501

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 cen-C3|16 3.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 10796328 - 10796823

NM_013637 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12021079642410796625
2034001079671810796915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6773822Full LengthBC049599protamine 1
6774637Full LengthBC059733protamine 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038665  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013637 NP_038665 P02319 Protamine_P1

Related Sequences

 
mRNAGenPeptSwissProt
K02926 AAA39980 P02319
M27500 AAA39985 P02319
BC049599 AAH49599 A3KMD0
BC059733 AAH59733 P02319
AK007068 BAC25162 P02319
AK018980 BAC25572 Q8CEM2
X14003 CAA32169 P02319

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prm1 NP_038665 R.norvegicus Prm1 24685   NP_001002850 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)