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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snai2, snail homolog 2 (Drosophila)
Sequence ID:NM_011415
Entrez Gene ID:20583
Ensembl ID:ENSMUSG00000022676

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16 9.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 14705851 - 14709395

NM_011415 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11941470595114706144
1957431470680314707351
74420111470820714709474

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30242610Full LengthBC062164snail homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035545  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011415 NP_035545 Q3UZ96
P97469
zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
U79550 AAB38365 Q3UZ96
P97469
U97059 AAB58704 Q3UZ96
P97469
BC062164 AAH62164 Q3UZ96
P97469
AK133968 BAE21961 Q3UZ96
P97469

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snai2 NP_035545 H.sapiens SNAI2 6591 Gene Info NP_003059 96
D.melanogaster esg 34903   NP_476600 66
A.gambiae AgaP_AGAP008274 1277710   XP_317196 58
C.elegans K02D7.2 186874   NP_499902 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta