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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tdp2, tyrosyl-DNA phosphodiesterase 2
Sequence ID:NM_019551
Entrez Gene ID:56196
Ensembl ID:ENSMUSG00000035958

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.1|13 12.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 24831684 - 24842146

NM_019551 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12712492352724923797
2723572492387824923963
3585282492788424928054
5296202492872324928814
6217392493001524930133
7409102493225624932426
91119762493295524934020

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130788Full LengthBC132511TRAF and TNF receptor associated protein
40130790Full LengthBC132513TRAF and TNF receptor associated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062424  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019551 NP_062424 Q9JJX7 Exo_endo_phos

Related Sequences

 
mRNAGenPeptSwissProt
BC132511 AAI32512 Q9JJX7
BC132513 AAI32514 Q9JJX7
AK167707 BAE39751 Q3TIU5
AJ251328 CAB92971 Q9JJX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tdp2 NP_062424 R.norvegicus Tdp2 498749   NP_001030119 88
H.sapiens TDP2 51567 Gene Info NP_057698 69
C.elegans Y63D3A.4 173276   NP_493461 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)