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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ap1s2, adaptor-related protein complex 1, sigma 2 subunit
Sequence ID:NM_026887
Entrez Gene ID:108012
Ensembl ID:ENSMUSG00000031367

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F5|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 163909195 - 163932501

NM_026887 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1114160347091160347204
115293160349260160349438
294402160354406160354514
403540160355637160355774
5413184160364834160367477

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6485320Full LengthBC046964adaptor-related protein complex 1, sigma 2 subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081163  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026887 NP_081163 Q8BW87 Clat_adaptor_s

Related Sequences

 
mRNAGenPeptSwissProt
BC046964 AAH46964 Q8BW87
AK005223 BAB23892 Q9DB50
AK043776 BAC31652 Q8BLQ6
AK045558 BAC32418 Q9DB50
AK047724 BAC33140 Q9DB50
AK053941 BAC35599 Q8BW87
AK167690 BAE39737 Q3TIV9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ap1s2 NP_081163 H.sapiens AP1S2 8905 Gene Info NP_003907 99
R.norvegicus Ap1s2 302671   NP_001121003 99
D.melanogaster AP-1sigma 42835   NP_651198 87
A.gambiae AgaP_AGAP004283 1274441   XP_313555 85
C.elegans aps-1 178989   NP_504559 82
N.crassa NCU10618 5847413   XP_001728227 64
A.thaliana AT4G35410 829694   NP_195267 63
A.thaliana AP19 816245   NP_565415 63
P.falciparum PF11_0187 810734   XP_001347858 62
S.cerevisiae APS1 850868   NP_013271 57
S.pombe SPAP27G11.06c 2542885   NP_593410 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)