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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Actg1, actin, gamma, cytoplasmic 1
Sequence ID:NM_009609
Entrez Gene ID:11465
Ensembl ID:ENSMUSG00000062825

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 120345689 - 120348488

NM_009609 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
38881120207003120207846
8821063120207950120208131
10641502120208224120208662
15031742120208949120209188
17431871120209282120209410
18721931120209738120209797

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257312Full LengthBC003337actin, gamma, cytoplasmic 1
3499390Full LengthBC023248actin, gamma, cytoplasmic 1
4218945Full LengthBC021796actin, gamma, cytoplasmic 1
30841085Full LengthBC099371actin, gamma, cytoplasmic 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033739  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009609 NP_033739 P63260
Q4KL81
Actin

Related Sequences

 
mRNAGenPeptSwissProt
M21495 AAA37168 P63260
Q4KL81
AF195094 AAF08293 Q9QZ83
BC003337 AAH03337 P63260
Q4KL81
BC021796 AAH21796 P63260
Q4KL81
BC023248 AAH23248 P63260
Q4KL81
BC099371 AAH99371 P63260
Q4KL81
AK076081 BAC36167 P63260
Q4KL81
AK087983 BAC40075 P63260
Q4KL81
AK149927 BAE29172 Q3UD81
AK150209 BAE29380 Q3UD81
AK152202 BAE31031 P63260
Q4KL81
AK153446 BAE32001 P63260
Q4KL81
AK157726 BAE34171 P63260
Q4KL81
AK159867 BAE35441 P63260
Q4KL81
AK162157 BAE36758 Q3TSB7
X13055 CAA31455 P63260

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Actg1 NP_033739 H.sapiens ACTG1 71 Gene Info NP_001186883 100
R.norvegicus LOC100361457 100361457   XP_002729242 100
R.norvegicus Actg1 287876   NP_001120921 100
A.gambiae ACT5C_ANOGA 1272407   XP_001230772 98
D.melanogaster Act5C 31521   NP_001014725 98
C.elegans act-5 176793   NP_499809 94
S.pombe act1 2540051   NP_595618 91
N.crassa NCU04173 3877297   XP_961133 90
S.cerevisiae ACT1 850504   NP_116614 89
A.thaliana ACT2 821411   NP_188508 87
A.thaliana ACT8 841347   NP_175350 87
P.falciparum ACT1 811495   XP_001350847 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta