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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Itm2b, integral membrane protein 2B
Sequence ID:NM_008410
Entrez Gene ID:16432
Ensembl ID:ENSMUSG00000022108

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D3|14 32.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 73362410 - 73385289

NM_008410 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
29137376203873762949
91410647376434873764498
106511757376555873765668
117613827376612773766333
138315117376810573768233
151217737378481673785077

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3583154Full LengthBC004731integral membrane protein 2B
3599190Full LengthBC010320integral membrane protein 2B
4458918Full LengthBC021786integral membrane protein 2B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032436  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008410 NP_032436 O89051 BRICHOS

Related Sequences

 
mRNAGenPeptSwissProt
U76253 AAC63851 O89051
BC004731 AAH04731 O89051
BC010320 AAH10320 O89051
BC021786 AAH21786 O89051
AB030203 BAA92766 O89051
AB030204 BAA92767 Q9JME4
AK002599 BAB22220 O89051
AK002796 BAB22365 Q9CW90
AK003224 BAB22653 Q9D1Q3
AK003587 BAB22877 O89051
AK005125 BAB23828 O89051
AK008861 BAB25935 Q9CVA8
AK076139 BAC36212 O89051
AK077482 BAC36822 O89051
AK150378 BAE29510 O89051
AK150396 BAE29523 Q3UCT9
AK151714 BAE30633 O89051
AK151889 BAE30773 O89051
AK152068 BAE30922 O89051
AK152516 BAE31278 O89051
AK152650 BAE31387 O89051
AK152731 BAE31452 O89051
AK152983 BAE31632 O89051
AK153103 BAE31723 O89051
AK159340 BAE35002 O89051
AK159426 BAE35073 O89051
AK159619 BAE35235 O89051
AK159628 BAE35242 O89051
AK159792 BAE35374 O89051
AK159962 BAE35517 O89051
AK160101 BAE35628 Q3TVJ0
AK160725 BAE35970 O89051

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Itm2b NP_032436 R.norvegicus Itm2b 290364   NP_001006964 98
H.sapiens ITM2B 9445 Gene Info NP_068839 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)