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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hmga1-rs1, high mobility group AT-hook I, related sequence 1
Sequence ID:NM_001166476
NM_001166477
Entrez Gene ID:111241
Ensembl ID:ENSMUSG00000078249

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11 73.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27556696 - 27559645

 Exon Info From UCSC:
NM_001166476
NM_001166477

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3500572IncompleteBC008125high mobility group AT-hook I, related sequence 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166476 NP_001159948    
NM_001166477 NP_001159949    

Related Sequences

 
mRNAGenPeptSwissProt
BC013455 AAH13455 Q566K0
P17095
BC093496 AAH93496 Q566K0
P17095

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hmga1-rs1 NP_001159948 R.norvegicus Hmga1 117062   NP_647543 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)