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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rom1, rod outer segment membrane protein 1
Sequence ID:NM_009073
Entrez Gene ID:19881
Ensembl ID:ENSMUSG00000071648

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19 8.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:19: 8927397 - 8929356

NM_009073 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
150690018719002376
50775390024679002713
754152690030739003845

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527997Full LengthBC014827rod outer segment membrane protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033099  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009073 NP_033099 Q3UZZ7
P32958
Tetraspannin

Related Sequences

 
mRNAGenPeptSwissProt
BC014827 AAH14827 P32958
AK133529 BAE21708 Q3UZZ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rom1 NP_033099 R.norvegicus Rom1 309201   NP_001009690 95
H.sapiens ROM1 6094 Gene Info NP_000318 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)