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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mc2r, melanocortin 2 receptor
Sequence ID:NM_001271716
NM_001271717
NM_008560
Entrez Gene ID:17200
Ensembl ID:ENSMUSG00000045569

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E2|18 37.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 68409806 - 68429244

Transcript StartTranscript EndChromosomal Start Chromosomal End
114106856656068567969
141115226856946068569571
152315706858886568588912

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862232Full LengthBC139210melanocortin 2 receptor
8862233Full LengthBC139211melanocortin 2 receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032586  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271716 NP_001258645    
NM_001271717 NP_001258646    
NM_008560 NP_032586 Q64326
Q544P9
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC139210 AAI39211 Q544P9
BC139211 AAI39212 Q544P9
AK033100 BAC28151 Q64326
Q544P9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mc2r NP_032586 R.norvegicus Mc2r 282839   NP_001093961 96
H.sapiens MC2R 4158 Gene Info NP_000520 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)