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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cxcl16, chemokine (C-X-C motif) ligand 16
Sequence ID:NM_023158
Entrez Gene ID:66102
Ensembl ID:ENSMUSG00000018920

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11|11 B4

Chromosomal Position (from UCSC)

Chromosomal Position:11: 70455364 - 70459447

NM_023158 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112117026773570268945
121216197026915670269563
162017027027224670272328
170318417027253070272668
184224487027287970273485

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3988542Full LengthBC019961chemokine (C-X-C motif) ligand 16

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023158 NP_075647 Q8BSU2  

Related Sequences

 
mRNAGenPeptSwissProt
AF277001 AAG31754 Q8BSU2
AF301017 AAG34366 Q8BSU2
BC019961 AAH19961 Q8BSU2
GQ380016 ADD14004 D9YM45
GQ380017 ADD14005 D9YM45
AK009599 BAB26384 Q8BSU2
AK028875 BAC26166 Q8BSU2
AK030515 BAC27000 Q8BSU2
AK150224 BAE29391 Q8BSU2
AK151330 BAE30309 Q8BSU2
AK152102 BAE30949 Q8BSU2
AK152547 BAE31302 Q8BSU2
AK153192 BAE31792 Q8BSU2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcl16 NP_075647 R.norvegicus Cxcl16 497942   NP_001017478 79
H.sapiens CXCL16 58191 Gene Info NP_071342 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)