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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Slco3a1, solute carrier organic anion transporter family, member 3a1
Sequence ID:NM_001038643
NM_023908
Entrez Gene ID:108116
Ensembl ID:ENSMUSG00000025790

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 D1

Chromosomal Position (from UCSC)

Chromosomal Position:7: 74284239 - 74554678

 Exon Info From UCSC:
NM_001038643
NM_023908

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2598913Full LengthBC025059solute carrier organic anion transporter family, member 3a1
4954997IncompleteBC094464solute carrier organic anion transporter family, member 3a1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076397  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001038643 NP_001033732    
NM_023908 NP_076397 Q8R3L5 OATP
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
AF226324 AAF35370 Q8R3L5
BC025059 AAH25059 Q8R3L5
BC094464 AAH94464 Q8R3L5
AK020010 BAB31965 Q8R3L5
AK037938 BAC29904 Q8R3L5
AK087071 BAC39796 Q8BU79
AK135124 BAE22430 Q3UXY3
AK152488 BAE31259 Q8R3L5
AK166266 BAE38670 Q8R3L5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slco3a1 NP_076397 R.norvegicus Slco3a1 140915   NP_803434 99
H.sapiens SLCO3A1 28232 Gene Info NP_037404 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)