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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vmn1r48, vomeronasal 1 receptor 48
Sequence ID:NM_053218
Entrez Gene ID:113845
Ensembl ID:ENSMUSG00000057592

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_053218 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19098998592689986834

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014642Full LengthBC141611vomeronasal 1 receptor, A3
100014222BC140225vomeronasal 1 receptor, A3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444448  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053218 NP_444448 Q9EQ52 V1R

Related Sequences

 
mRNAGenPeptSwissProt
BC140225 AAI40226  
BC141611 AAI41612  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vmn1r48 NP_444448 M.musculus Vmn1r47 113846 Gene Info NP_444449 95
M.musculus Vmn1r45 22297 Gene Info NP_035814 88
M.musculus Vmn1r51 22296 Gene Info NP_035813 82
M.musculus Vmn1r42 113848 Gene Info NP_444451 81
M.musculus Vmn1r43 113847 Gene Info NP_444450 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)