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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prkrip1, Prkr interacting protein 1 (IL11 inducible)
Sequence ID:NM_025774
Entrez Gene ID:66801
Ensembl ID:ENSMUSG00000039737

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 G1

Chromosomal Position (from UCSC)

Chromosomal Position:5: 136181072 - 136198932

NM_025774 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11140136656226136657365
11411208136665421136665488
12091294136667769136667854
12951395136670166136670266
13961474136673649136673727
14751654136674644136674823

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1494676Full LengthBC027503Prkr interacting protein 1 (IL11 inducible)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080050  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025774 NP_080050 Q9CWV6 DUF1168

Related Sequences

 
mRNAGenPeptSwissProt
BC027503 AAH27503 Q9CWV6
AK010359 BAB26879 Q9CWV6
AK010961 BAB27293 Q9CWV6
AK018438 BAB31212 Q9CWV6
AK046035 BAC32579 Q9CWV6
AK088862 BAC40620 Q9CWV6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prkrip1 NP_080050 R.norvegicus Prkrip1 498171   NP_001092263 96
H.sapiens PRKRIP1 79706 Gene Info NP_078929 92
A.gambiae AgaP_AGAP011850 1280802   XP_320669 48
D.melanogaster CG8441 36792   NP_611094 46
C.elegans F37A4.2 175947   NP_498474 45
N.crassa NCU01844 3872775   XP_956628 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)