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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrwd1, leucine-rich repeats and WD repeat domain containing 1
Sequence ID:NM_027891
Entrez Gene ID:71735
Ensembl ID:ENSMUSG00000029703

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 136123066 - 136136001

 Exon Info From UCSC:
NM_027891

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6396815Full LengthBC048397leucine-rich repeats and WD repeat domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082167  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027891 NP_082167 Q8BUI3 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC048397 AAH48397 Q8BUI3
AK004717 BAB23500 Q8BUI3
AK051910 BAC34810 Q8BUI3
AK084948 BAC39318 Q8BUI3
AK153976 BAE32292 Q8BUI3
AK167020 BAE39194 Q8BUI3
AK167868 BAE39884 Q8BUI3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrwd1 NP_082167 H.sapiens LRWD1 222229 Gene Info NP_690852 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)