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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arid3c, AT rich interactive domain 3C (BRIGHT-like)
Sequence ID:NM_001017362
NM_001252622
Entrez Gene ID:550619
Ensembl ID:ENSMUSG00000066224

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 41724138 - 41730286

Transcript StartTranscript EndChromosomal Start Chromosomal End
14984167086741671364
4995884167173641671825
5897714167203841672220
77210614167277741673066
106212454167318041673363
124613184167508541675157
131916994167691641677296
170017514167812241678173

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9054128Full LengthBC145563AT rich interactive domain 3C (BRIGHT-like)
9055849Full LengthBC141237AT rich interactive domain 3C (BRIGHT-like)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001017362  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001017362 NP_001017362 A6PWV5 ARID
NM_001252622 NP_001239551    

Related Sequences

 
mRNAGenPeptSwissProt
BC141237 AAI41238 A6PWV5
BC145563 AAI45564 B7ZP08

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arid3c NP_001017362 R.norvegicus Arid3c 502946   XP_578450 96
H.sapiens ARID3C 138715 Gene Info NP_001017363 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)