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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cntfr, ciliary neurotrophic factor receptor
Sequence ID:NM_001136056
NM_001146080
NM_016673
Entrez Gene ID:12804
Ensembl ID:ENSMUSG00000028444

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A5|4 19.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 41658240 - 41675104

 Exon Info From UCSC:
NM_001136056
NM_001146080
NM_016673

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6389656Full LengthBC046974ciliary neurotrophic factor receptor
6415187Full LengthBC050928ciliary neurotrophic factor receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057882  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136056 NP_001129528 O88507  
NM_001146080 NP_001139552    
NM_016673 NP_057882   fn3
ig

Related Sequences

 
mRNAGenPeptSwissProt
AF068615 AAC25711 O88507
BC046974 AAH46974 O88507
BC050928 AAH50928 O88507
AK015675 BAB29926 Q9D586
AK137026 BAE23207 Q3UVR2
AB154246 BAI44631 C9K0Z6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cntfr NP_057882 R.norvegicus Cntfr 313173   NP_001003929 98
H.sapiens CNTFR 1271 Gene Info NP_001193940 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)