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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifi205, Interferon activated gene 205
Sequence ID:NM_172648
Entrez Gene ID:226695
Ensembl ID:ENSMUSG00000054203

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 95.3

Chromosomal Position (from UCSC)

Chromosomal Position:1: 174012240 - 174031683

NM_172648 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1291175942128175942418
292480175945089175945277
481903175947364175947786
9041062175956658175956816
10631196175957323175957456
11971481175958328175958612
14821613175961754175961885

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3466347Full LengthBC040425interferon activated gene 205

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766236  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172648 NP_766236 Q8CGE8 PAAD_DAPIN
HIN

Related Sequences

 
mRNAGenPeptSwissProt
BC040425 AAH40425 Q8CGE8
AK040191 BAC30535 Q8CGE8
CT010211 CAJ18419 Q8CGE8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifi205 NP_766236 M.musculus Mnda 381308 Gene Info NP_001028622 90
M.musculus Ifi204 15951 Gene Info NP_032355 84
M.musculus Mndal 100040462   NP_001164324 82
M.musculus AI607873 226691 Gene Info XP_985790 60
M.musculus Pydc4 623121 Gene Info NP_001170820 45
M.musculus BC094916 545384 Gene Info NP_001019892 42
M.musculus Pydc3 100033459 Gene Info NP_001156410 40
M.musculus Pyhin1 236312 Gene Info NP_778191 39
M.musculus Gm4955 240921 Gene Info XP_136331 36
M.musculus Ifi203 15950 Gene Info NP_001038946 33
M.musculus Gm16340 100504287 Gene Info XP_003084512 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)