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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnp1, transition protein 1
Sequence ID:NM_009407
Entrez Gene ID:21958
Ensembl ID:ENSMUSG00000026182

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1 38.4 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 73015082 - 73015891

NM_009407 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
62567306164873061898
2574317306229873062472

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6773623Full LengthBC061170transition protein 1
6775189Full LengthBC048494transition protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033433  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009407 NP_033433 Q545L6
P10856
TP1

Related Sequences

 
mRNAGenPeptSwissProt
BC048494 AAH48494 Q545L6
P10856
BC061170 AAH61170 Q545L6
P10856
AK006495 BAB24620 Q545L6
P10856
X12521 CAA31039 Q545L6
P10856

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnp1 NP_033433 R.norvegicus Tnp1 24839   NP_058752 98
H.sapiens TNP1 7141 Gene Info NP_003275 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)