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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnpo3, transportin 3
Sequence ID:NM_177296
Entrez Gene ID:320938
Ensembl ID:ENSMUSG00000012535

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A3|6 7.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 69016561 - 69016839

 Exon Info From UCSC:
NM_177296

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6313452Full LengthBC064646transportin 3
30619729Full LengthBC075678transportin 3
4006595IncompleteBC023273transportin 3
6334654IncompleteBC052756transportin 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177296 NP_796270 Q6P2B1 Xpo1

Related Sequences

 
mRNAGenPeptSwissProt
L43814 AAA70260  
U40582 AAA83268  
U21453 AAA86356  
M18568 AAA88302  
BC052756 AAH52756 Q6P2B1
BC064646 AAH64646 Q6P2B1
BC075678 AAH75678 Q6DI95
AK011912 BAB27912 Q9CSV3
AK049446 BAC33754 Q6P2B1
AK077714 BAC36974 Q6P2B1
AK220184 BAD90369 Q571K5
AK145723 BAE26611 Q3UL39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnpo3 NP_796270 R.norvegicus Tnpo3 296954   NP_001100057 100
H.sapiens TNPO3 23534 Gene Info NP_036602 99
A.gambiae AgaP_AGAP003576 1274240   XP_562427 46
D.melanogaster Trn-SR 33465   NP_608708 43
C.elegans tsr-1 173601   NP_494279 31
A.thaliana AT5G62600 836381   NP_201066 27
S.cerevisiae MTR10 854331   NP_014803 27
S.pombe SPBC11G11.07 2539916   NP_595725 27
N.crassa NCU06355 3878528   XP_962389 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)