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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. H2-K1, histocompatibility 2, K1, K region
Sequence ID:XM_003945745
NM_001001892
Entrez Gene ID:14972
Ensembl ID:ENSMUSG00000061232

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.44 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 33997360 - 34000347

NM_001001892 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
245153413295634133447
5165543413356034133598
5555873413377134133803
5887073413398234134101
7089833413422934134504
98412593413621534136490
126015293413667834136947
153016693413713834137277

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3156482Full LengthBC011306histocompatibility 2, K1, K region
4947189Full LengthBC080756histocompatibility 2, K1, K region
9088081Full LengthBC151193histocompatibility 2, K1, K region
5356649IncompleteBC054430histocompatibility 2, K1, K region

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001892  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001892 NP_001001892 P01901
O35641
MHC_I
MHC_I_C
C1-set
NM_010380 NP_034510 P01900
P01899
MHC_I
MHC_I_C
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
M60168 AAA37765 Q64272
M60169 AAA37766 Q61642
L23494 AAA39552 Q31141
L23495 AAA39553 Q31142
J00393 AAA39576 Q31154
J00395 AAA39579 Q31156
K00129 AAA39580 O19467
P01899
M34932 AAA39596 P04223
M23445 AAA39598 Q9QWF4
M12185 AAA39599 O19467
M37680 AAA39600 Q31167
M37681 AAA39601 O78207
M37682 AAA39602 Q31168
M34961 AAA39604 Q31169
M58156 AAA39608 Q31172
J00400 AAA39648 P01901
M13200 AAA39649 Q31189
J00402 AAA39652 P01902
M11975 AAA39654 P04223
K01762 AAA39655 Q31193
M14827 AAA39656 P14428
K01446 AAA39664 O19473
J00407 AAA39698 P01896
J00406 AAA39699 Q31210
J00409 AAA39700 Q31211
M69069 AAA39740 Q61893
M69070 AAA39741 Q61894
M69071 AAA39742 Q61895
M69072 AAA39743 Q64272
M69073 AAA39744 Q61896
L36306 AAA80451 Q31614
L36307 AAA80452 Q31614
L36308 AAA80453 Q31148
L36309 AAA80454 Q31614
L36310 AAA80455 Q31634
L36311 AAA80456 Q31634
L36312 AAA80457 Q31634
L36065 AAA89205 P01902
Q5KTQ2
L36068 AAA89206 Q792Z7
P01899
U47325 AAB17603 Q792Z7
P01899
U47326 AAB17604 P01900
U47327 AAB17605 Q95457
U47328 AAB17606 Q7JJ15
P01901
U47329 AAB17607 P01902
Q5KTQ2
U47330 AAB17608 P04223
U55817 AAB18954 Q31116
U55818 AAB18955 O19449
S70184 AAB30503 Q31290
U97660 AAB62678 O19476
BC011306 AAH11306 Q921P3
BC023409 AAH23409 Q8R3Y0
BC054430 AAH54430 Q7TN03
BC080756 AAH80756 Q66JU6
BC092284 AAH92284 Q569W0
BC106173 AAI06174 Q3KQJ3
BC132088 AAI32089 Q792Z7
BC132655 AAI32656 Q792Z7
BC151193 AAI51194 Q64272
AF470231 AAL82455 Q8SNA4
AY496687 AAR89505 Q6RJ38
AY496688 AAR89506 Q6RJ37
AY989882 AAX98169  
DQ346646 ABC59908 Q5KTQ2
DQ346647 ABC59909 Q5KTQ2
DQ346648 ABC59910 Q5KTQ2
AK150790 BAE29854 Q3UBW0
AK150967 BAE29998 Q7JJ15
P01901
AK153419 BAE31979 Q7JJ15
P01901
AK159572 BAE35194 Q792Z7
P01899
AK160102 BAE35629 Q3TVI9
AK168517 BAE40397 Q3TH01
X00172 CAA24997 P03991
X00246 CAA25061 P01895
X52490 CAA36730 Q792Z7
P01899
XM_003945745 XP_003945794  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2-K1 NP_001001892 M.musculus H2-D1 14964   NP_034510 84
R.norvegicus RT1-A2 24974   NP_001008829 80
R.norvegicus RT1-CE2 414779   NP_001008840 79
R.norvegicus RT1-A1 24973   NP_001008827 79
R.norvegicus RT1-CE15 414789   NP_001008838 79
R.norvegicus RT1-CE12 309600   NP_001008835 78
R.norvegicus RT1-CE1 309603   NP_001008832 78
R.norvegicus RT1-CE16 414819   NP_001008839 77
R.norvegicus RT1-CE13 414790   NP_001008836 77
R.norvegicus RT1-CE4 414783   NP_001008842 76
R.norvegicus RT1-Cl 24977   NP_996730 76
R.norvegicus RT1-A3 309627   NP_001008830 76
R.norvegicus RT1-CE11 414791   NP_001008834 75
R.norvegicus RT1-CE7 368153   NP_001008845 75
R.norvegicus RT1-CE5 309607   NP_001029158 75
R.norvegicus RT1-CE10 414792   NP_001008833 75
R.norvegicus RT1-CE3 414793   NP_001008841 73
H.sapiens HLA-C 3107 Gene Info NP_002108 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta