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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Barx1, BarH-like homeobox 1
Sequence ID:NM_007526
Entrez Gene ID:12022
Ensembl ID:ENSMUSG00000021381

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A5|13 21.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 48665123 - 48665993

NM_007526 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13044875840448758707
3055964876039448760685
5976814876076948760853
68213614876119648761875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733796IncompleteBC119047BarH-like homeobox 1
8733798IncompleteBC119049BarH-like homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031552  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007526 NP_031552 Q9ER42 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC119047 AAI19048 Q9ER42
BC119049 AAI19050 Q9ER42
Y07960 CAA69257 Q9ER42
AJ297677 CAC10357 Q9ER42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Barx1 NP_031552 R.norvegicus Barx1 364680   NP_001102350 98
H.sapiens BARX1 56033 Gene Info NP_067545 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)