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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rspo1, R-spondin homolog (Xenopus laevis)
Sequence ID:NM_138683
Entrez Gene ID:192199
Ensembl ID:ENSMUSG00000028871

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 124986429 - 125009099

NM_138683 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1242124663673124663914
243576124668336124668669
577768124682225124682416
769918124684390124684539
9191107124684827124685015
11081834124685616124686342

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861853Full LengthBC138831R-spondin homolog (Xenopus laevis)
8861855Full LengthBC138833R-spondin homolog (Xenopus laevis)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619624  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_138683 NP_619624 Q9Z132 TSP_1

Related Sequences

 
mRNAGenPeptSwissProt
BC138831 AAI38832 B1ASC1
BC138833 AAI38834 B1ASC1
AB016768 BAA75640 Q9Z132
AK132277 BAE21077 Q9Z132

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rspo1 NP_619624 R.norvegicus Rspo1 313589   NP_001101450 97
H.sapiens RSPO1 284654 Gene Info NP_001033722 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)