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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Casp12, caspase 12
Sequence ID:NM_009808
Entrez Gene ID:12364
Ensembl ID:ENSMUSG00000025887

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9 1.11 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 5345501 - 5373032

 Exon Info From UCSC:
NM_009808

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5375109Full LengthBC028979caspase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033938  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009808 NP_033938 Q8BSX6
O08736
CARD
Peptidase_C14

Related Sequences

 
mRNAGenPeptSwissProt
BC028979 AAH28979 O08736
AY675223 AAT91066 Q6B837
AY675224 AAT91067 Q6B836
AK030309 BAC26891 Q8BSX6
AK046681 BAC32835 Q8BQQ5
AK077256 BAC36712 O08736
AK161525 BAE36443 O08736
Y13090 CAA73532 O08736

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Casp12 NP_033938 R.norvegicus Casp12 156117   NP_569106 88
H.sapiens CASP12 100506742 Gene Info NP_001177945 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)