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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cat, catalase
Sequence ID:NM_009804
Entrez Gene ID:12359
Ensembl ID:ENSMUSG00000027187

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E3|2 57.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 103453906 - 103485123

 Exon Info From UCSC:
NM_009804

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4241333Full LengthBC013447catalase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033934  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009804 NP_033934 P24270 EC 1.11.1.6 Catalase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M29394 AAA37371 P24270 EC 1.11.1.6
M62897 AAA37373 P24270
Q542K4
EC 1.11.1.6
L25069 AAA66054 P24270 EC 1.11.1.6
BC013447 AAH13447 P24270
Q542K4
EC 1.11.1.6
AY040626 AAK73774 Q91XI2  
AK075853 BAC36005 Q8C6E3  
AK088168 BAC40187 P24270
Q542K4
EC 1.11.1.6
AK133881 BAE21910 Q3UZE7  
AK148961 BAE28703 Q3UF58  
AK150893 BAE29939 P24270 EC 1.11.1.6
AK159152 BAE34859 P24270 EC 1.11.1.6
AK159885 BAE35454 P24270 EC 1.11.1.6
AK159891 BAE35458 P24270 EC 1.11.1.6
AK159913 BAE35476 Q3TVZ1  
AK169069 BAE40856 P24270 EC 1.11.1.6
X52108 CAA36342 P24270
Q542K4
EC 1.11.1.6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cat NP_033934 R.norvegicus Cat 24248   NP_036652 95
H.sapiens CAT 847 Gene Info NP_001743 89
D.melanogaster Cat 40048   NP_536731 67
A.gambiae CAT1 1275711   XP_314995 66
C.elegans ctl-2 175085   NP_001022473 65
C.elegans ctl-1 259738   NP_496979 64
C.elegans ctl-3 175086   NP_741058 64
D.melanogaster CG9314 34198   NP_609248 59
S.cerevisiae CTA1 851843   NP_010542 52
S.pombe ctt1 2539418   NP_587682 51
A.thaliana CAT1 838652   NP_564121 48
N.crassa NCU05169 3878021   XP_961873 47
A.thaliana CAT2 829661   NP_195235 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta