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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tlr6, toll-like receptor 6
Sequence ID:NM_011604
Entrez Gene ID:21899
Ensembl ID:ENSMUSG00000051498

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.1|5 37.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 64952978 - 64955582

NM_011604 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124996534433365346831
250026006535117265351272

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30056593Full LengthBC055366toll-like receptor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035734  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011604 NP_035734 Q7TPC5 LRR_1
LRRCT
TIR

Related Sequences

 
mRNAGenPeptSwissProt
AF314636 AAG38563 Q3UV88
Q9EPW9
BC055366 AAH55366 Q7TPC5
DQ790887 ABG78745 Q0PM14
AB020808 BAA78632 Q9EPW9
AK137502 BAE23384 Q3UV88

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tlr6 NP_035734 R.norvegicus Tlr6 305353   NP_997487 88
H.sapiens TLR6 10333 Gene Info NP_006059 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)