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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stag1, stromal antigen 1
Sequence ID:NM_009282
Entrez Gene ID:20842
Ensembl ID:ENSMUSG00000037286

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 F1

Chromosomal Position (from UCSC)

Chromosomal Position:9: 100643637 - 100957399

 Exon Info From UCSC:
NM_009282

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30537388Full LengthBC062954stromal antigen 1
30095297IncompleteBC069841stromal antigen 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033308  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009282 NP_033308 Q9D3E6 STAG

Related Sequences

 
mRNAGenPeptSwissProt
BC062954 AAH62954 Q9D3E6
AK017978 BAB31022 Q9D3E6
AK043215 BAC31496 Q8C918
AK048671 BAC33417 Q8C818
AK086295 BAC39645 Q8C3C5
Z75332 CAA99733 Q9D3E6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stag1 NP_033308 R.norvegicus Stag1 315958   NP_001101649 100
H.sapiens STAG1 10274 Gene Info NP_005853 99
A.gambiae AgaP_AGAP006998 1270101   XP_308771 49
D.melanogaster SA 33974   NP_477268 48
A.thaliana SCC3 819410   NP_566119 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)