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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Myo1f, myosin IF
Sequence ID:NM_053214
Entrez Gene ID:17916
Ensembl ID:ENSMUSG00000024300

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B-C|17 17.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 33575789 - 33578149

 Exon Info From UCSC:
NM_053214

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4167558Full LengthBC046502myosin IF

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444444  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053214 NP_444444 Q811E7 SH3_1
Myosin_head
Myosin_TH1

Related Sequences

 
mRNAGenPeptSwissProt
BC046502 AAH46502 Q811E7
AF426466 AAL26546 Q91ZI3
AK021181 BAB32317 Q9CRE1
AK131188 BAD21438 Q6KAL9
X97650 CAA66251 P70248

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myo1f NP_444444 R.norvegicus Myo1f 314654   NP_001101546 99
H.sapiens MYO1F 4542 Gene Info NP_036467 94
S.cerevisiae MYO5 855136   NP_013827 44
S.pombe myo1 2539659   NP_595402 43
N.crassa NCU02111 3880254   XP_964105 42
S.cerevisiae MYO3 853729   NP_012793 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)