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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccl17, chemokine (C-C motif) ligand 17
Sequence ID:NM_011332
Entrez Gene ID:20295
Ensembl ID:ENSMUSG00000031780

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 94810452 - 94812035

NM_011332 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11199733435297334470
1202379733508597335202
2385139733565997335934

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3328278Full LengthBC028505chemokine (C-C motif) ligand 17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035462  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011332 NP_035462 Q9WUZ6 IL8

Related Sequences

 
mRNAGenPeptSwissProt
AF125570 AAD56600 Q9R043
AF125571 AAD56601 Q9WUZ6
AF125572 AAD56602 Q9WUZ6
BC028505 AAH28505 Q9WUZ6
AK007663 BAB25171 Q9WUZ6
AJ242587 CAB45256 Q9WUZ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl17 NP_035462 R.norvegicus Ccl17 117518   NP_476492 85
H.sapiens CCL17 6361 Gene Info NP_002978 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)